data analysis

A periodic Markov model to formalize animal migration on a network

Regular, long-distance migrations of thousands of animal species have consequences for the ecosystems that they visit, modifying trophic interactions and transporting many non-pathogenic and pathogenic organisms. The spatial structure and dynamic …

The marine bacterium Phaeobacter inhibens secures external ammonium by rapid buildup of intracellular nitrogen stocks

Reduced nitrogen species are key nutrients for biological productivity in the oceans. Ammonium is often present in low and growth-limiting concentrations, albeit peaks occur during collapse of algal blooms or via input from deep sea upwelling and …

Biodiversity change is uncoupled from species richness trends: Consequences for conservation and monitoring

1. Global concern about human impact on biological diversity has triggered an intense research agenda on drivers and consequences of biodiversity change in parallel with international policy seeking to conserve biodiversity and associated ecosystem …

Global rise in emerging alien species results from increased accessibility of new source pools

Our ability to predict the identity of future invasive alien species is largely based upon knowledge of prior invasion history. Emerging alien species—those never before encountered as aliens—therefore pose a significant challenge to biosecurity interventions worldwide. Using a global database of the first regional records of alien species covering the years 1500–2005 we detected a surprisingly high proportion of species in recent records that have never been recorded as alien before. The high proportion of these emerging alien species mainly resulted from the increased accessibility of new source species pools in the native range. Risk assessment approaches that rely less on invasion history will need to be prioritized.

The intermediate distance hypothesis of biological invasions

Biological invasions are a worldwide phenomenon, but the global flows between native and alien regions have rarely been investigated in a cross‐taxonomic study. We therefore lack a thorough understanding of the global patterns of alien species …

Complementary metaproteomic approaches to assess the bacterioplankton response toward a phytoplankton spring bloom in the Southern North Sea

Annually recurring phytoplankton spring blooms are characteristic of temperate coastal shelf seas. During these blooms, environmental conditions, including nutrient availability, differ considerably from non-bloom conditions, affecting the entire …

Influence of nanoLC column and gradient length as well as MS/MS frequency and sample complexity on shotgun protein identification of marine bacteria

Protein identification by shotgun proteomics, i.e., nano-liquid chromatography (nanoLC) peptide separation online coupled to electrospray ionization (ESI) mass spectrometry (MS)/MS, is the most widely used gel-free approach in proteome research. …

Non-Redfield, nutrient synergy and flexible internal elemental stoichiometry in a marine bacterium

The stoichiometric constraints of algal growth are well understood, whereas there is less knowledge for heterotrophic bacterioplankton. Growth of the marine bacterium Phaeobacter inhibens DSM 17395, belonging to the globally distributed Roseobacter …

Competition-induced starvation drives large-scale population cycles in Antarctic krill

Antarctic krill (Euphausia superba)—one of the most abundant animal species on Earth—exhibits a five to six year population cycle, with oscillations in biomass exceeding one order of magnitude. Previous studies have postulated that the krill cycle is …

No saturation in the accumulation of alien species worldwide

Although research on human-mediated exchanges of species has substantially intensified during the last centuries, we know surprisingly little about temporal dynamics of alien species accumulations across regions and taxa. Using a novel database of …